ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7m13A1 - ECOD Domain | ECOD

ECOD/Domains/e7m13A1

e7m13A1

UID: 002722708

PDB

Range: A:-1-345
PDB: 7M13 chain A(all domains)
UniProt: Q0P8I6 (all domains)
Gene: fcl

Molecule: GDP-L-fucose synthase

3D Structure

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Related Domains

Browse other domains in Epimerase, RmlD_sub_bind →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyEpimerase, RmlD_sub_bind(2003.1.1.150)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

PF01370Epimerase

NAD dependent epimerase/dehydratase family

ClanCL0063NADP_Rossmann

PF04321RmlD_sub_bind

RmlD substrate binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 7M13 RCSB PDB: 7M13 PDBe: 7M13 UniProt: Q0P8I6

Downloads

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Drug annotations from DrugDomain.