ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6witC1 - ECOD Domain | ECOD

ECOD/Domains/e6witC1

e6witC1

UID: 002723479

PDB

Range: C:128-194
PDB: 6WIT chain C(all domains)

Molecule: 16055 V1V2 1FD6 Scaffold

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupV1/V2 domain in HIV gp120(6173)

HH-groupV1/V2 domain in HIV gp120(6173.1)

TT-groupV1/V2 domain in HIV gp120(6173.1.1)

FFamilyGP120(6173.1.1.1)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 6WIT RCSB PDB: 6WIT PDBe: 6WIT

Downloads

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