ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6witC2 - ECOD Domain | ECOD

ECOD/Domains/e6witC2

e6witC2

UID: 002723480

PDB

Range: C:118-127,C:195-242
PDB: 6WIT chain C(all domains)

Molecule: 16055 V1V2 1FD6 Scaffold

3D Structure

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Related Domains

Browse other domains in IgG_binding_B →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupImmunoglobulin-binding domains(221.3)

TT-groupImmunoglobulin-binding domains(221.3.1)

FFamilyIgG_binding_B(221.3.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer.

Pfam Families

PF01378IgG_binding_B

B domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 6WIT RCSB PDB: 6WIT PDBe: 6WIT

Downloads

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