ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zm2A2 - ECOD Domain | ECOD

ECOD/Domains/e6zm2A2

e6zm2A2

UID: 002723981

PDB

Range: A:289-472
PDB: 6ZM2 chain A(all domains)
UniProt: G0SEG4 (all domains)
Gene: CTHT_0063660

Molecule: Putative mRNA splicing factor

3D Structure

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Related Domains

Browse other domains in DEAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDEAD(2004.1.1.29)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Hexane-1,6-DiolHEZ
drugDrugBank DB02210

Pfam Families

DEAD/DEAH box helicase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6ZM2 RCSB PDB: 6ZM2 PDBe: 6ZM2 UniProt: G0SEG4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

3-(N-morpholino)propanesulfonic acid

drugDrugBank DB03434

Beryllium trifluoride ionBEF

Magnesium ionMG

metal

N-propanolPOL

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.