ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7d7kA2 - ECOD Domain | ECOD

ECOD/Domains/e7d7kA2

e7d7kA2

UID: 002724018

PDB

Range: A:61-315
PDB: 7D7K chain A(all domains)
UniProt: P0DTD1 (all domains)
Gene: rep

Molecule: Non-structural protein 3

3D Structure

Loading viewer...

Related Domains

Browse other domains in CoV_peptidase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyCoV_peptidase(219.1.1.43)

Ligands

in contact, ≤ 4 Å

CaffeineCFF
drugDrugBank DB00201
Zinc ionZN
metal

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Pfam Families

PF08715CoV_peptidase

Coronavirus papain-like peptidase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 7D7K RCSB PDB: 7D7K PDBe: 7D7K UniProt: P0DTD1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ion

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.