ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7o21A1 - ECOD Domain | ECOD

ECOD/Domains/e7o21A1

e7o21A1

UID: 002724185

PDB

Range: A:29-189
PDB: 7O21 chain A(all domains)
UniProt: Q6MNZ7 (all domains)
Gene: Bd1075

Molecule: Uncharacterized conserved

3D Structure

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Related Domains

Browse other domains in YkuD →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupL,D-transpeptidase catalytic domain-like(4091)

HH-groupL,D-transpeptidase catalytic domain-like(4091.1)

TT-groupL,D-transpeptidase catalytic domain-like(4091.1.1)

FFamilyYkuD(4091.1.1.1)

Ligands

in contact, ≤ 4 Å

Bromide ionBR
Thiocyanate ionSCN

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

L,D-transpeptidase catalytic domain

ClanCL0508YkuD

External Links

ECOD PDB View: 7O21 RCSB PDB: 7O21 PDBe: 7O21 UniProt: Q6MNZ7

Downloads

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