ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1pkjB1 - ECOD Domain | ECOD

ECOD/Domains/e1pkjB1

e1pkjB1

UID: 000027245

PDB

Range: B:1-175
PDB: 1PKJ chain B(all domains)
UniProt: Q57872 (all domains)
Gene: dcd

Molecule: Bifunctional deaminase/diphosphatase

3D Structure

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Related Domains

Browse other domains in DCD →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupdUTPase-like(70.2)

TT-groupdUTPase-like(70.2.1)

FFamilyDCD(70.2.1.5)

Ligands

in contact, ≤ 4 Å

Deoxyuridine-5'-TriphosphateDUT
drugDrugBank DB02333

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

dCTP deaminase-like

ClanCL0153dUTPase

External Links

ECOD PDB View: 1PKJ RCSB PDB: 1PKJ PDBe: 1PKJ UniProt: Q57872

Downloads

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