ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7a60B1 - ECOD Domain | ECOD

ECOD/Domains/e7a60B1

e7a60B1

UID: 002725358

PDB

Range: B:32-262
PDB: 7A60 chain B(all domains)
UniProt: Q9K2N0 (all domains)
Gene: blaVIM-2

Molecule: Beta-lactamase VIM-2

3D Structure

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Related Domains

Browse other domains in Lactamase_B →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B(247.1.1.1)

Ligands

in contact, ≤ 4 Å

(5~{Z})-2-[1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-5-(4-oxidanylbutylidene)-2~{H}-1,3-thiazole-4-carboxylic acidQZH
Zinc ionZN
metal

+ 1 additive (Formic acid)

Formic acid

Pfam Families

PF00753Lactamase_B

Metallo-beta-lactamase superfamily

ClanCL0381Metallo-HOrase

External Links

ECOD PDB View: 7A60 RCSB PDB: 7A60 PDBe: 7A60 UniProt: Q9K2N0

Downloads

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DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.