ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7losA1 - ECOD Domain | ECOD

ECOD/Domains/e7losA1

e7losA1

UID: 002725545

PDB

Range: A:61-315
PDB: 7LOS chain A(all domains)
UniProt: P0DTD1 (all domains)
Gene: rep

Molecule: Non-structural protein 3

3D Structure

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Related Domains

Browse other domains in CoV_peptidase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyCoV_peptidase(219.1.1.43)

Ligands

in contact, ≤ 4 Å

5-(azetidin-3-ylamino)-2-methyl-~{N}-[(1~{R})-1-[3-[5-[[[(3~{R})-oxolan-3-yl]amino]methyl]thiophen-2-yl]phenyl]ethyl]benzamideY97
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ion

Pfam Families

PF08715CoV_peptidase

Coronavirus papain-like peptidase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 7LOS RCSB PDB: 7LOS PDBe: 7LOS UniProt: P0DTD1

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.