ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7abnH1 - ECOD Domain | ECOD

ECOD/Domains/e7abnH1

e7abnH1

UID: 002725770

PDB

Range: H:112-314
PDB: 7ABN chain H(all domains)
UniProt: A0A5F1BUV8 (all domains)

Molecule: UbiD-like decarboxylase

3D Structure

Loading viewer...

Related Domains

Browse other domains in UbiD →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyUbiD(1.1.5.11)

Ligands

in contact, ≤ 4 Å

1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-yl)-D-ribitol4LU
Potassium ionK
metal
MANGANESE (II) IONMN

Pfam Families

3-octaprenyl-4-hydroxybenzoate carboxy-lyase Rift-related domain

ClanCL0336FMN-binding

External Links

ECOD PDB View: 7ABN RCSB PDB: 7ABN PDBe: 7ABN UniProt: A0A5F1BUV8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.