ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7agdB1 - ECOD Domain | ECOD

ECOD/Domains/e7agdB1

e7agdB1

UID: 002725839

PDB

Range: B:1-181
PDB: 7AGD chain B(all domains)
UniProt: B8YPM3 (all domains)
Gene: SAPP1

Molecule: Candidapepsin

3D Structure

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Related Domains

Browse other domains in Asp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp(1.1.1.1)

Ligands

in contact, ≤ 4 Å

FormaldehydeFOR
drugDrugBank DB03843within 5 Å only

+ 1 additive (Triethylene glycol)

Triethylene glycolPGE
DrugBank DB02327

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 7AGD RCSB PDB: 7AGD PDBe: 7AGD UniProt: B8YPM3

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.