ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7co5D1 - ECOD Domain | ECOD

ECOD/Domains/e7co5D1

e7co5D1

UID: 002728026

PDB

Range: D:53-77,D:98-277
PDB: 7CO5 chain D(all domains)
UniProt: Q9HVX1 (all domains)
Gene: algW

Molecule: AlgW protein

3D Structure

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Related Domains

Browse other domains in Trypsin_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyTrypsin_2(1.1.5.33)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13365Trypsin_2

Trypsin-like peptidase domain

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 7CO5 RCSB PDB: 7CO5 PDBe: 7CO5 UniProt: Q9HVX1

Downloads

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