ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7d4oB1 - ECOD Domain | ECOD

ECOD/Domains/e7d4oB1

e7d4oB1

UID: 002728565

PDB

Range: B:1-219
PDB: 7D4O chain B(all domains)
UniProt: P0DSP4 (all domains)
Gene: cdnD02

Molecule: Cyclic AMP-AMP-GMP synthase

3D Structure

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Related Domains

Browse other domains in SMODS →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilySMODS(316.1.1.26)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
ATPATP
drugDrugBank DB00171
Magnesium ion

Pfam Families

Second Messenger Oligonucleotide or Dinucleotide Synthetase domain

ClanCL0260NTP_transf

External Links

ECOD PDB View: 7D4O RCSB PDB: 7D4O PDBe: 7D4O UniProt: P0DSP4

Downloads

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metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.