ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7jxsA1 - ECOD Domain | ECOD

ECOD/Domains/e7jxsA1

e7jxsA1

UID: 002730046

PDB

Range: A:7-110
PDB: 7JXS chain A(all domains)
UniProt: Q6E183 (all domains)
Gene: gag

Molecule: Matrix protein

3D Structure

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Related Domains

Browse other domains in Gag_p17 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRetroviral matrix proteins(612)

HH-groupRetroviral matrix proteins(612.1)

TT-groupRetroviral matrix proteins(612.1.1)

FFamilyGag_p17(612.1.1.1)

Ligands

in contact, ≤ 4 Å

Dodecaethylene glycol12P

+ 2 additives (Acetate, Sulfate ion)

AcetateACT
DrugBank DB14511
Sulfate ionSO4

Pfam Families

PF00540Gag_p17

gag gene protein p17 (matrix protein)

ClanCL0074Matrix

External Links

ECOD PDB View: 7JXS RCSB PDB: 7JXS PDBe: 7JXS UniProt: Q6E183

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.