ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7kz9B3 - ECOD Domain | ECOD

ECOD/Domains/e7kz9B3

e7kz9B3

UID: 002731269

PDB

Range: B:60-163
PDB: 7KZ9 chain B(all domains)
UniProt: A0A1H3V8R8 (all domains)

Molecule: Peptide/nickel transport system substrate-binding protein AapF

3D Structure

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Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupOligo-peptide binding protein (OPPA) insertion domain(304.136)

TT-groupOligo-peptide binding protein (OPPA) insertion domain(304.136.1)

FFamilySBP_bac_5(304.136.1.1)

Ligands

in contact, ≤ 4 Å

N,N~2~-bis(2-hydroxyethyl)glycinamideXN7

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

ECOD PDB View: 7KZ9 RCSB PDB: 7KZ9 PDBe: 7KZ9 UniProt: A0A1H3V8R8

Downloads

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