ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7nhkP1 - ECOD Domain | ECOD

ECOD/Domains/e7nhkP1

e7nhkP1

UID: 002733643

PDB

Range: P:2-135
PDB: 7NHK chain P(all domains)
UniProt: A0A1B4XKU1 (all domains)
Gene: rplP

Molecule: 50S ribosomal protein L16

3D Structure

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Related Domains

Browse other domains in Ribosomal_L16 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupRibosomal protein L10e(325.1.5)

FFamilyRibosomal_L16(325.1.5.1)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00252Ribosomal_L16

Ribosomal protein L16p/L10e

ClanCL0021OB

External Links

ECOD PDB View: 7NHK RCSB PDB: 7NHK PDBe: 7NHK UniProt: A0A1B4XKU1

Downloads

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