ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6umbA1 - ECOD Domain | ECOD

ECOD/Domains/e6umbA1

e6umbA1

UID: 002735427

PDB

Range: A:339-511
PDB: 6UMB chain A(all domains)
UniProt: Q9C029 (all domains)
Gene: TRIM7

Molecule: E3 ubiquitin-protein ligase TRIM7

3D Structure

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Related Domains

Browse other domains in SPRY,PRY →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilySPRY,PRY(10.1.1.9)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer.

Pfam Families

SPRY domain

ClanCL0004Concanavalin

SPRY-associated domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 6UMB RCSB PDB: 6UMB PDBe: 6UMB UniProt: Q9C029

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.