ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6wasJ1 - ECOD Domain | ECOD

ECOD/Domains/e6wasJ1

e6wasJ1

UID: 002735597

PDB

Range: J:126-196
PDB: 6WAS chain J(all domains)

Molecule: 1FD6 16055 V1V2 scaffold

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupV1/V2 domain in HIV gp120(6173)

HH-groupV1/V2 domain in HIV gp120(6173.1)

TT-groupV1/V2 domain in HIV gp120(6173.1.1)

FFamilyGP120(6173.1.1.1)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

Shown in the structure viewer.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 6WAS RCSB PDB: 6WAS PDBe: 6WAS

Downloads

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