ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6wnkO1 - ECOD Domain | ECOD

ECOD/Domains/e6wnkO1

e6wnkO1

UID: 002735856

PDB

Range: O:10-235
PDB: 6WNK chain O(all domains)
UniProt: A5U4D5 (all domains)
Gene: prcA

Molecule: Proteasome subunit alpha

3D Structure

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Related Domains

Browse other domains in Proteasome →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome(210.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (N,N-dimethylformamide)

N,N-dimethylformamideDMF
DrugBank DB01844

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

External Links

ECOD PDB View: 6WNK RCSB PDB: 6WNK PDBe: 6WNK UniProt: A5U4D5

Downloads

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