ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6yjmB1 - ECOD Domain | ECOD

ECOD/Domains/e6yjmB1

e6yjmB1

UID: 002736626

PDB

Range: B:265-480
PDB: 6YJM chain B(all domains)
UniProt: Q9UNA0 (all domains)
Gene: ADAMTS5

Molecule: A disintegrin and metalloproteinase with thrombospondin motifs 5

3D Structure

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Related Domains

Browse other domains in Reprolysin →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyReprolysin(2498.1.1.4)

Ligands

in contact, ≤ 4 Å

AldumastatOU5
drugDrugBank DB18824
Calcium ionCA
metal
Zinc ion

Pfam Families

PF01421Reprolysin

Reprolysin (M12B) family zinc metalloprotease

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 6YJM RCSB PDB: 6YJM PDBe: 6YJM UniProt: Q9UNA0

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.