ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ypoB1 - ECOD Domain | ECOD

ECOD/Domains/e6ypoB1

e6ypoB1

UID: 002736713

PDB

Range: B:80-231
PDB: 6YPO chain B(all domains)
UniProt: P49077 (all domains)
Gene: PYRB

Molecule: PYRB

3D Structure

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Related Domains

Browse other domains in OTCace_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupAspartate/ornithine carbamoyltransferase(2003.1.14)

FFamilyOTCace_N(2003.1.14.2)

Ligands

in contact, ≤ 4 Å

Uridine monophosphateU5P
drugDrugBank DB03685

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF02729OTCace_N

Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain

External Links

ECOD PDB View: 6YPO RCSB PDB: 6YPO PDBe: 6YPO UniProt: P49077

Downloads

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Drug annotations from DrugDomain.