ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6yvbE1 - ECOD Domain | ECOD

ECOD/Domains/e6yvbE1

e6yvbE1

UID: 002736773

PDB

Range: E:79-231
PDB: 6YVB chain E(all domains)
UniProt: P49077 (all domains)
Gene: PYRB

Molecule: PYRB

3D Structure

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Related Domains

Browse other domains in OTCace_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupAspartate/ornithine carbamoyltransferase(2003.1.14)

FFamilyOTCace_N(2003.1.14.2)

Ligands

in contact, ≤ 4 Å

PHOSPHORIC ACID MONO(FORMAMIDE)ESTERCP

+ 2 additives (Glycerin, Acetate ion)

GlycerinGOL
DrugBank DB09462
Acetate ionACT

Pfam Families

PF02729OTCace_N

Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain

External Links

ECOD PDB View: 6YVB RCSB PDB: 6YVB PDBe: 6YVB UniProt: P49077

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.