ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zbmA1 - ECOD Domain | ECOD

ECOD/Domains/e6zbmA1

e6zbmA1

UID: 002736897

PDB

Range: A:39-374
PDB: 6ZBM chain A(all domains)
UniProt: Q9Z4P9 (all domains)
Gene: aman6

Molecule: Alpha-1,6-mannanase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_76 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_76(109.2.1.13)

Ligands

in contact, ≤ 4 Å

alpha-D-mannopyranoseMAN
(1~{R},2~{R},3~{R},4~{S},5~{R})-4-[[(1~{S},2~{S},3~{S},4~{R},5~{R})-5-(hydroxymethyl)-2,3,4-tris(oxidanyl)cyclohexyl]oxymethyl]cyclohexane-1,2,3,5-tetrolQE8

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOL

Pfam Families

PF03663Glyco_hydro_76

Glycosyl hydrolase family 76

ClanCL00596_Hairpin

External Links

ECOD PDB View: 6ZBM RCSB PDB: 6ZBM PDBe: 6ZBM UniProt: Q9Z4P9

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.