ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6pkxD1 - ECOD Domain | ECOD

ECOD/Domains/e6pkxD1

e6pkxD1

UID: 002739373

PDB

Range: D:40-51,D:95-427
PDB: 6PKX chain D(all domains)
UniProt: A0A0R4IMY7 (all domains)
Gene: trpm2

Molecule: Transient receptor potential cation channel subfamily M member 2

3D Structure

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Related Domains

Browse other domains in LSDAT_euk →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMCP/YpsA-related(7563)

HH-groupMCP/YpsA-related(7563.1)

TT-groupMCP/YpsA-related(7563.1.1)

FFamilyLSDAT_euk(7563.1.1.6)

Ligands

in contact, ≤ 4 Å

Adenosine-5-DiphosphoriboseAR6
drugDrugBank DB02059

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18139LSDAT_euk

SLOG in TRPM

ClanCL0349SLOG

External Links

ECOD PDB View: 6PKX RCSB PDB: 6PKX PDBe: 6PKX UniProt: A0A0R4IMY7

Downloads

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