ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7jsnB2 - ECOD Domain | ECOD

ECOD/Domains/e7jsnB2

e7jsnB2

UID: 002740887

PDB

Range: B:450-824
PDB: 7JSN chain B(all domains)
UniProt: P23439 (all domains)
Gene: PDE6B

Molecule: Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta

3D Structure

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Related Domains

Browse other domains in PDEase_I →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPDEase-like(131)

HH-groupHD-domain/PDEase-like(131.1)

TT-groupHD-domain/PDEase-like(131.1.1)

FFamilyPDEase_I(131.1.1.1)

Ligands

in contact, ≤ 4 Å

VardenafilVDN
drugDrugBank DB00862
Magnesium ionMG
metal
Zinc ion

Pfam Families

PF00233PDEase_I

3'5'-cyclic nucleotide phosphodiesterase

ClanCL0237HD_PDEase

External Links

ECOD PDB View: 7JSN RCSB PDB: 7JSN PDBe: 7JSN UniProt: P23439

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.