ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6kqyA2 - ECOD Domain | ECOD

ECOD/Domains/e6kqyA2

e6kqyA2

UID: 002741452

PDB

Range: A:7-118,A:156-230,A:576-709
PDB: 6KQY chain A(all domains)
UniProt: Q9P2J5 (all domains)
Gene: LARS1

Molecule: Leucine--tRNA ligase, cytoplasmic

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1+tRNA-synt_1g →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1+tRNA-synt_1g(2005.1.1.40)

Ligands

in contact, ≤ 4 Å

LeucineLEU

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00133tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

ClanCL0039HUP

PF09334tRNA-synt_1g

tRNA synthetases class I (M)

ClanCL0039HUP

External Links

ECOD PDB View: 6KQY RCSB PDB: 6KQY PDBe: 6KQY UniProt: Q9P2J5

Downloads

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