ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6x3bA1 - ECOD Domain | ECOD

ECOD/Domains/e6x3bA1

e6x3bA1

UID: 002754919

PDB

Range: A:-2-301
PDB: 6X3B chain A(all domains)
UniProt: A0A071L2P8 (all domains)
Gene: rmd

Molecule: GDP-6-deoxy-D-mannose reductase

3D Structure

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Related Domains

Browse other domains in GDP_Man_Dehyd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyGDP_Man_Dehyd(2003.1.1.72)

Ligands

in contact, ≤ 4 Å

NADPHNDP
drugDrugBank DB02338

+ 1 additive (Nitrate)

NitrateNO3
DrugBank DB14049

Shown in the structure viewer.

Pfam Families

PF16363GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6X3B RCSB PDB: 6X3B PDBe: 6X3B UniProt: A0A071L2P8

Downloads

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Drug annotations from DrugDomain.