ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wpoB1 - ECOD Domain | ECOD

ECOD/Domains/e2wpoB1

e2wpoB1

UID: 000027558

PDB

Range: B:9-256
PDB: 2WPO chain B(all domains)
UniProt: P16753 (all domains)
Gene: UL80

Molecule: HUMAN CYTOMEGALOVIRUS PROTEASE

3D Structure

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Related Domains

Browse other domains in Peptidase_S21 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupHerpes virus serine proteinase, assemblin(50)

HH-groupHerpes virus serine proteinase, assemblin(50.1)

TT-groupHerpes virus serine proteinase, assemblin(50.1.1)

FFamilyPeptidase_S21(50.1.1.1)

Ligands

in contact, ≤ 4 Å

(2S)-2-(3,3-dimethylbutanoylamino)-N-[(2S)-1-[[(2S,3S)-3-hydroxy-4-[(4-iodophenyl)methylamino]-4-oxo-butan-2-yl]amino]-1,4-dioxo-4-pyrrol-1-yl-butan-2-yl]-3,3-dimethyl-butanamide01E

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00716Peptidase_S21

Assemblin (Peptidase family S21)

ClanCL0201Peptidase_SH

External Links

ECOD PDB View: 2WPO RCSB PDB: 2WPO PDBe: 2WPO UniProt: P16753

Downloads

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