ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ld5A1 - ECOD Domain | ECOD

ECOD/Domains/e7ld5A1

e7ld5A1

UID: 002756963

PDB

Range: A:8-156
PDB: 7LD5 chain A(all domains)
UniProt: A0QVQ5 (all domains)
Gene: pnp

Molecule: Polyribonucleotide nucleotidyltransferase

3D Structure

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Related Domains

Browse other domains in RNase_PH →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyRNase_PH(212.1.1.10)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01138RNase_PH

3' exoribonuclease family, domain 1

ClanCL0329S5

External Links

ECOD PDB View: 7LD5 RCSB PDB: 7LD5 PDBe: 7LD5 UniProt: A0QVQ5

Downloads

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