ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1o6eB1 - ECOD Domain | ECOD

ECOD/Domains/e1o6eB1

e1o6eB1

UID: 000027577

PDB

Range: B:5-235
PDB: 1O6E chain B(all domains)
UniProt: P03234 (all domains)
Gene: BVRF2/BdRF1

Molecule: CAPSID PROTEIN P40

3D Structure

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Related Domains

Browse other domains in Peptidase_S21 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupHerpes virus serine proteinase, assemblin(50)

HH-groupHerpes virus serine proteinase, assemblin(50.1)

TT-groupHerpes virus serine proteinase, assemblin(50.1.1)

FFamilyPeptidase_S21(50.1.1.1)

Ligands

in contact, ≤ 4 Å

PhosphorylisopropaneISP
drugDrugBank DB03976

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00716Peptidase_S21

Assemblin (Peptidase family S21)

ClanCL0201Peptidase_SH

External Links

ECOD PDB View: 1O6E RCSB PDB: 1O6E PDBe: 1O6E UniProt: P03234

Downloads

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