ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7cq3A1 - ECOD Domain | ECOD

ECOD/Domains/e7cq3A1

e7cq3A1

UID: 002759970

PDB

Range: A:7-213
PDB: 7CQ3 chain A(all domains)

Molecule: Structure-specific endonuclease subunit SLX1

3D Structure

Loading viewer...

Related Domains

Browse other domains in GIY-YIG →

Classification

AArchitecturea+b three layers(a.12)

XX-groupGIY-YIG endonuclease(821)

HH-groupGIY-YIG endonuclease(821.1)

TT-groupGIY-YIG endonuclease(821.1.1)

FFamilyGIY-YIG(821.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01541GIY-YIG

GIY-YIG catalytic domain

ClanCL0418GIY-YIG

External Links

ECOD PDB View: 7CQ3 RCSB PDB: 7CQ3 PDBe: 7CQ3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure