ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7cypB3 - ECOD Domain | ECOD

ECOD/Domains/e7cypB3

e7cypB3

UID: 002760133

PDB

Range: B:309-328,B:530-620,B:641-694
PDB: 7CYP chain B(all domains)

Molecule: SARS-CoV-2 Spike glycoprotein

3D Structure

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Related Domains

Browse other domains in CoV_S1_C →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupBeta domain of coronavirus spike glycoprotein(1043)

HH-groupBeta domain of coronavirus spike glycoprotein(1043.1)

TT-groupBeta domain of coronavirus spike glycoprotein(1043.1.1)

FFamilyCoV_S1_C(1043.1.1.1)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

Shown in the structure viewer.

Pfam Families

PF19209CoV_S1_C

Coronavirus spike glycoprotein S1, C-terminal

External Links

ECOD PDB View: 7CYP RCSB PDB: 7CYP PDBe: 7CYP

Downloads

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