ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ka0A2 - ECOD Domain | ECOD

ECOD/Domains/e7ka0A2

e7ka0A2

UID: 002761523

PDB

Range: A:89-341
PDB: 7KA0 chain A(all domains)

Molecule: Phenylalanine--tRNA ligase alpha subunit

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2d →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2d(314.1.1.3)

Ligands

in contact, ≤ 4 Å

PhenylalaninePHE
drugDrugBank DB00120
Magnesium ionMG
metal

+ 3 additives (Glycerin, Triethylene glycol, Sulfate ion)

Pfam Families

PF01409tRNA-synt_2d

tRNA synthetases class II core domain (F)

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 7KA0 RCSB PDB: 7KA0 PDBe: 7KA0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Triethylene glycolPGE

DrugBank DB02327

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.