ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ka0B2 - ECOD Domain | ECOD

ECOD/Domains/e7ka0B2

e7ka0B2

UID: 002761527

PDB

Range: B:413-492
PDB: 7KA0 chain B(all domains)

Molecule: Phenylalanine--tRNA ligase beta subunit

3D Structure

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Related Domains

Browse other domains in B5 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupPutative DNA-binding domain(101.1.9)

FFamilyB5(101.1.9.5)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 3 additives (Glycerin, Triethylene glycol, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Triethylene glycol

Pfam Families

tRNA synthetase B5 domain

ClanCL0123HTH

External Links

ECOD PDB View: 7KA0 RCSB PDB: 7KA0 PDBe: 7KA0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB02327

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.