ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5s54B2 - ECOD Domain | ECOD

ECOD/Domains/e5s54B2

e5s54B2

UID: 002767142

PDB

Range: B:246-437
PDB: 5S54 chain B(all domains)

Molecule: Tubulin beta-2B chain

3D Structure

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Related Domains

Browse other domains in Tubulin_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupTubulin C-terminal domain-like(301.6)

TT-groupTubulin C-terminal domain-like(301.6.1)

FFamilyTubulin_C(301.6.1.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
Magnesium ionMG
metal
1-(pyridin-4-yl)-N-[(thiophen-2-yl)methyl]methanamine

Pfam Families

PF03953Tubulin_C

Tubulin C-terminal domain

ClanCL0442Tubulin_C

External Links

ECOD PDB View: 5S54 RCSB PDB: 5S54 PDBe: 5S54

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.