ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5s61D1 - ECOD Domain | ECOD

ECOD/Domains/e5s61D1

e5s61D1

UID: 002767472

PDB

Range: D:246-441
PDB: 5S61 chain D(all domains)

Molecule: Tubulin beta-2B chain

3D Structure

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Related Domains

Browse other domains in Tubulin_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupTubulin C-terminal domain-like(301.6)

TT-groupTubulin C-terminal domain-like(301.6.1)

FFamilyTubulin_C(301.6.1.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
1-[2-methyl-1,3-bis(oxidanyl)propan-2-yl]-3-phenyl-ureaAYV
Magnesium ionMG

Pfam Families

PF03953Tubulin_C

Tubulin C-terminal domain

ClanCL0442Tubulin_C

External Links

ECOD PDB View: 5S61 RCSB PDB: 5S61 PDBe: 5S61

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.