ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zjoA1 - ECOD Domain | ECOD

ECOD/Domains/e6zjoA1

e6zjoA1

UID: 002768806

PDB

Range: A:64-179,A:201-286
PDB: 6ZJO chain A(all domains)

Molecule: Small ribosomal subunit biogenesis GTPase RsgA

3D Structure

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Related Domains

Browse other domains in RsgA_GTPase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRsgA_GTPase(2004.1.1.96)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOL

Pfam Families

PF03193RsgA_GTPase

RsgA GTPase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6ZJO RCSB PDB: 6ZJO PDBe: 6ZJO

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.