ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6zo8B6 - ECOD Domain | ECOD

ECOD/Domains/e6zo8B6

e6zo8B6

UID: 002768971

PDB

Range: B:567-673
PDB: 6ZO8 chain B(all domains)

Molecule: Multidrug efflux pump subunit AcrB

3D Structure

Loading viewer...

Related Domains

Browse other domains in ACR_tran →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin domains in multidrug efflux transporter(304.28)

TT-groupMultidrug efflux transporter AcrB pore domain(304.28.1)

FFamilyACR_tran(304.28.1.1)

Ligands

in contact, ≤ 4 Å

Dodecyl-Alpha-D-MaltosideLMU
drugDrugBank DB03279
MinocyclineMIY
drugDrugBank DB01017

Shown in the structure viewer.

Pfam Families

PF00873ACR_tran

AcrB/AcrD/AcrF family

ClanCL0322RND_permease

External Links

ECOD PDB View: 6ZO8 RCSB PDB: 6ZO8 PDBe: 6ZO8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.