ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zobA4 - ECOD Domain | ECOD

ECOD/Domains/e6zobA4

e6zobA4

UID: 002769039

PDB

Range: A:725-812
PDB: 6ZOB chain A(all domains)

Molecule: Multidrug efflux pump subunit AcrB

3D Structure

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Related Domains

Browse other domains in ACR_tran →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin domains in multidrug efflux transporter(304.28)

TT-groupMultidrug efflux transporter AcrB TolC docking domain(304.28.2)

FFamilyACR_tran(304.28.2.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00873ACR_tran

AcrB/AcrD/AcrF family

ClanCL0322RND_permease

External Links

ECOD PDB View: 6ZOB RCSB PDB: 6ZOB PDBe: 6ZOB

Downloads

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