ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zodB1 - ECOD Domain | ECOD

ECOD/Domains/e6zodB1

e6zodB1

UID: 002769096

PDB

Range: B:505-566,B:869-1033
PDB: 6ZOD chain B(all domains)

Molecule: Multidrug efflux pump subunit AcrB

3D Structure

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Related Domains

Browse other domains in ACR_tran →

Classification

AArchitecturealpha bundles(a.7)

XX-groupMultidrug efflux transporter AcrB transmembrane domain(5067)

HH-groupMultidrug efflux transporter AcrB transmembrane domain(5067.1)

TT-groupMultidrug efflux transporter AcrB transmembrane domain(5067.1.1)

FFamilyACR_tran(5067.1.1.1)

Ligands

in contact, ≤ 4 Å

Fusidic acidFUA
drugDrugBank DB02703

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00873ACR_tran

AcrB/AcrD/AcrF family

ClanCL0322RND_permease

External Links

ECOD PDB View: 6ZOD RCSB PDB: 6ZOD PDBe: 6ZOD

Downloads

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