ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7bjtA2 - ECOD Domain | ECOD

ECOD/Domains/e7bjtA2

e7bjtA2

UID: 002769954

PDB

Range: A:25-388
PDB: 7BJT chain A(all domains)

Molecule: Alginate lyase, family PL17

3D Structure

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Related Domains

Browse other domains in Alginate_lyase →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyAlginate_lyase(109.2.1.17)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Magnesium ionMG
metal

+ 2 additives (Glycerin, D-Malic acid)

Glycerin

Pfam Families

PF05426Alginate_lyase

Alginate lyase

ClanCL00596_Hairpin

External Links

ECOD PDB View: 7BJT RCSB PDB: 7BJT PDBe: 7BJT

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

D-Malic acidMLT

DrugBank DB03499

Shown in the structure viewer. Drug annotations from DrugDomain.