ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zq2A1 - ECOD Domain | ECOD

ECOD/Domains/e6zq2A1

e6zq2A1

UID: 002770297

PDB

Range: A:16-248
PDB: 6ZQ2 chain A(all domains)

Molecule: Cationic trypsin

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

D-phenylalanyl-N-{4-[amino(iminio)methyl]benzyl}-L-prolinamide32U
drugDrugBank DB07005
Calcium ionCA
metal

+ 2 additives (Glycerin, Sulfate ion)

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 6ZQ2 RCSB PDB: 6ZQ2 PDBe: 6ZQ2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.