ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ly1A1 - ECOD Domain | ECOD

ECOD/Domains/e7ly1A1

e7ly1A1

UID: 002772264

PDB

Range: A:223-289,A:411-561
PDB: 7LY1 chain A(all domains)

Molecule: Peptidoglycan D,D-transpeptidase FtsI

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyTranspeptidase(223.3.1.3)

Ligands

in contact, ≤ 4 Å

Vaborbactam4D6
drugDrugBank DB12107

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 7LY1 RCSB PDB: 7LY1 PDBe: 7LY1

Downloads

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