ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6pglC1 - ECOD Domain | ECOD

ECOD/Domains/e6pglC1

e6pglC1

UID: 002773889

PDB

Range: C:61-275
PDB: 6PGL chain C(all domains)

Molecule: Uncharacterized protein YLR132C

3D Structure

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Related Domains

Browse other domains in HVSL →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLigT-like(264)

HH-groupLigT-related(264.1)

TT-groupLigT-related(264.1.1)

FFamilyHVSL(264.1.1.6)

Ligands

in contact, ≤ 4 Å

PentaglymePG6
drugDrugBank DB02580
Uridine monophosphateU5P
drugDrugBank DB03685

+ 4 additives (Glycerin, Triethylene glycol, 1,2-ETHANEDIOL, …)

Pfam Families

Uncharacterised conserved protein

ClanCL02472H

External Links

ECOD PDB View: 6PGL RCSB PDB: 6PGL PDBe: 6PGL

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL
DrugBank DB09462
Triethylene glycolPGE
DrugBank DB02327
1,2-ETHANEDIOLEDO
Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.