ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zxbA1 - ECOD Domain | ECOD

ECOD/Domains/e6zxbA1

e6zxbA1

UID: 002775387

PDB

Range: A:129-298
PDB: 6ZXB chain A(all domains)

Molecule: Putative GGDEF/response regulator receiver domain protein

3D Structure

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Related Domains

Browse other domains in GGDEF →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyGGDEF(304.48.1.14)

Ligands

in contact, ≤ 4 Å

3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATEGH3
Magnesium ionMG
metal

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4

Pfam Families

Diguanylate cyclase, GGDEF domain

ClanCL0276Nucleot_cyclase

External Links

ECOD PDB View: 6ZXB RCSB PDB: 6ZXB PDBe: 6ZXB

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.