ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7lpeD1 - ECOD Domain | ECOD

ECOD/Domains/e7lpeD1

e7lpeD1

UID: 002780437

PDB

Range: D:416-601,D:626-719
PDB: 7LPE chain D(all domains)

Molecule: Transient receptor potential cation channel subfamily V member 1

3D Structure

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Related Domains

Browse other domains in YVC1_C →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyYVC1_C(5054.1.1.58)

Ligands

in contact, ≤ 4 Å

Capsaicin4DY
drugDrugBank DB06774
[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate6OU
1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine

Pfam Families

Calcium channel YVC1-like, C-terminal

ClanCL0030Ion_channel

External Links

ECOD PDB View: 7LPE RCSB PDB: 7LPE PDBe: 7LPE

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.