ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7mjvA2 - ECOD Domain | ECOD

ECOD/Domains/e7mjvA2

e7mjvA2

UID: 002781144

PDB

Range: A:14-161
PDB: 7MJV chain A(all domains)

Molecule: tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase

3D Structure

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Related Domains

Browse other domains in UPF0004 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupCheY-like(2007.1.3)

FFamilyUPF0004(2007.1.3.2)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118
FE3-S4 CLUSTERF3S
Magnesium ionMG

Pfam Families

PF00919UPF0004

Uncharacterized protein family UPF0004

ClanCL0304CheY

External Links

ECOD PDB View: 7MJV RCSB PDB: 7MJV PDBe: 7MJV

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.