ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7oy8H2 - ECOD Domain | ECOD

ECOD/Domains/e7oy8H2

e7oy8H2

UID: 002784514

PDB

Range: H:1-35
PDB: 7OY8 chain H(all domains)

Molecule: Photosynthetic reaction center, H-chain

3D Structure

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Related Domains

Browse other domains in PRCH →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction centre subunit H, transmembrane region(5002)

HH-groupPhotosystem II reaction centre subunit H, transmembrane region(5002.1)

TT-groupPhotosystem II reaction centre subunit H, transmembrane region(5002.1.1)

FFamilyPRCH(5002.1.1.1)

Ligands

in contact, ≤ 4 Å

UbidecarenoneU10
drugDrugBank DB09270within 5 Å only
Trans-Geranyl BACTERIOCHLOROPHYLL A07D
(2R,5R,11R,14R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-2,14-bis(tetradecanoyloxy)-4,6,10,12,16-pentaoxa-5,11-diphosphatriacont-1-yl tetradecanoate

Pfam Families

Photosynthetic reaction centre, H-chain N-terminal region

ClanCL0350PRC-barrel

External Links

ECOD PDB View: 7OY8 RCSB PDB: 7OY8 PDBe: 7OY8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl(9Z)-octadec-9-enoatePGW

Shown in the structure viewer. Drug annotations from DrugDomain.