ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7rfmB1 - ECOD Domain | ECOD

ECOD/Domains/e7rfmB1

e7rfmB1

UID: 002785020

PDB

Range: B:23-316
PDB: 7RFM chain B(all domains)

Molecule: Site-specific DNA-methyltransferase (adenine-specific)

3D Structure

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Related Domains

Browse other domains in Eco57I →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyEco57I(2003.1.5.62)

Ligands

in contact, ≤ 4 Å

7-{5-[(3-{[(4-tert-butylphenyl)carbamoyl]amino}propyl)(propan-2-yl)amino]-5-deoxy-beta-D-ribofuranosyl}-7H-pyrrolo[2,3-d]pyrimidin-4-amine0QK
Potassium ionK
metal

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

Eco57I restriction-modification methylase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 7RFM RCSB PDB: 7RFM PDBe: 7RFM

Downloads

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1,2-ETHANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.