ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7rmqA1 - ECOD Domain | ECOD

ECOD/Domains/e7rmqA1

e7rmqA1

UID: 002785428

PDB

Range: A:1-30
PDB: 7RMQ chain A(all domains)

Molecule: Cycloviolacin O2

3D Structure

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Related Domains

Browse other domains in Cyclotide →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupomega toxin-like(387)

HH-groupomega toxin-related(387.1)

TT-groupCyclotides(387.1.4)

FFamilyCyclotide(387.1.4.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Formic acid)

Formic acidFMT
DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03784Cyclotide

Cyclotide family

External Links

ECOD PDB View: 7RMQ RCSB PDB: 7RMQ PDBe: 7RMQ

Downloads

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